* fix(docker): mount the ChromaDB volume where the image actually persists
chromadb/chroma runs `chroma run /config.yaml`, and that config is one line:
persist_path: "/data". The image declares no VOLUME, so everything the store
writes lives in the container's writable layer. The chromadb-data volume was
mounted at /chroma/chroma — where pre-1.0 images kept the store — so it caught
nothing and the entire vector store was destroyed on every container recreate.
Nothing errors when that happens. The collection survives with a count of 0, so
retrieval simply returns nothing from then on, which reads as "no match".
docs/backup-restore.md tells users to archive the chromadb-data volume, which
means the documented backup was empty too.
Fixed in all three compose files. The volume was never written to, so there is
nothing to migrate.
* fix(tests,docs): harden volume-path test helper and document upgrade migration
tests/test_chromadb_volume_path.py
- _chromadb_volumes() now normalises long-form dict volume entries
(source/target/type map) to 'source:target' strings, preventing
AttributeError crashes if a future Compose change uses that syntax.
- test_chromadb_does_not_use_the_pre_1_0_path now uses split(':')[1]
comparison instead of endswith(), so mount-option suffixes (:z, :ro)
cannot mask a wrong legacy target path.
- Three new unit tests validate the helper against both YAML syntaxes
and the mount-option edge case explicitly.
docs/chromadb-volume-migration.md (new)
- Step-by-step guide for users upgrading from pre-#6166 Docker installs
whose ChromaDB data accumulated in the container's writable layer.
- Covers: detecting the situation, backing up via 'docker cp', seeding
the named volume before recreating the container, verification, and
rollback. Validated with disposable Docker volumes.
- Distinguishes fresh installs (no action needed) from existing
installs with live writable-layer data (action needed before recreate).
docs/backup-restore.md
- Extended ChromaDB caveat block to cross-reference the new migration
guide for users upgrading from pre-#6166.
Closes the P1 documentation gap and P2/P3 test-robustness findings
from the PR #6166 adversarial review.
* fix(docs,tests): eliminate ChromaDB migration data-loss risks and enforce safe cutover
- Require service quiescence before cold database copy to prevent torn SQLite pages
- Mandate container preservation via immutable Docker image commit before recreation
- Enforce positive empty check on destination volume prior to seeding
- Add staging container validation on an isolated loopback port before Compose cutover
- Provide verified rollback procedures prohibiting return to legacy /chroma/chroma mount
- Add regression test coverage for all migration safety invariants
---------
Co-authored-by: PR #6166 Reviewer <reviewer@odysseus-review.local>
Integrates the merged and frozen Wave 3 lab commit
b1666951faf8285054e1ca90f11533b0fb53fb57 with a normal merge, preserving
every Wave 4 commit unchanged.
Conflict: src/agent_runtime/resources.py. Wave 3's _control_plane_snapshot()
/ _control_plane_path(path, *, snapshot=None) split is kept. The snapshot adds
the effect-store directories to its prefix set after the recursive job-dir
inventory and no longer references path (the auto-merged prefix check would
have raised NameError there). _control_plane_path calls _aliases_effect_store
after its os.stat, only for multiply linked files, so single-link files never
list the store.
Semantic reconciliation (no textual conflict): bg_monitor keeps launch
settlement right after the first successful validate_job and before the
authority check, with Wave 3's post-drain revalidation intact. The
deleted-session branch, terminal before linkage validation, now settles a
validated launch too: that job is later pruned and its publication retired,
which would otherwise leave its effect RUNNING. Regression tests cover the
snapshot form of the effect-store check and both deleted-session linkage
outcomes.
Records the decision to recreate rather than cherry-pick 9012e208, the claim,
outcome, observation, invalidation and verification model, the durable log and
replay design, per-family adapters, completion-gate integration, browser and
background preservation, and residual P2 limitations.
Record metrics, triage, invariants, and classifications for the Wave 3
corrective implementation pass. Confirms 0 Wave 3 regressions remaining,
with 12358 tests passing across the repository.
A batch whose open succeeded but whose later command failed was recorded
as a failed navigation, so a following observation was wrongly labelled
stale. Use the per-command rows; when the outcome cannot be determined,
treat the page as unknown instead of claiming either result.
Own each agent-browser session as a browser tree: the daemon's POSIX
session, its runtime files and its Chrome profile. Timeouts, launch
failures, bootstrap recovery, cancellation and shutdown clean that tree
and verify nothing survives, instead of killing only the daemon and
orphaning Chrome. Per-call cleanup no longer sweeps every Chrome under
the runtime TMPDIR.
Sessionless calls get an ephemeral browser closed before returning.
Actions on one session are serialized. Recovery is bounded by one
deadline with at most one retry for local HTML open, and the retry flag
is no longer model-visible. Observations after a failed navigation are
marked stale. read URL navigates and extracts in one batch because
agent-browser has no read command. Results carry a browser_lifecycle
receipt with stages, timings, ownership and cleanup evidence.
Playwright MCP tool calls are bounded by
ODYSSEUS_BROWSER_MCP_CALL_TIMEOUT_S and are not retried. research_navigator
now passes timeout_ms.
`lab` and the public `dev` line share only the repository's first commit as a
merge base, so `git log lab..dev` lists two thousand commits that are almost
all already present on both sides under different SHAs. Nothing in that output
says which public fixes never reached `lab`, which is the only question that
matters before `lab` becomes a release.
`scripts/ref_parity_audit.py` samples the most distinctive added lines from
each commit in the range and searches the other tree for them with
`git grep -F`, then reports the file-level presence diff. The two complement
each other: a commit whose probes are all found while one of the files it added
is missing from the target is a fix whose production change was reproduced
without its test, which the line sampling alone cannot see.
Probes are stripped of indentation and searched for anywhere in the tree, so a
port that moved or was re-indented still reads as present. Verdicts are
absent / partial / present / no-probe, and the report says outright that the
commit verdicts are a heuristic while the two file lists are exact.
Read-only by construction: `git log`, `show`, `diff`, `grep`, `ls-tree` and
`merge-base` only, no remote access, and it does not import the app package.
